| Game Date |
Conference |
Road Team |
Score |
|
Home Team |
Score |
Box Score |
Recap |
Commentary |
| National Collegiate Baseball Writers Poll |
| 3/31/2006 | * | #1 Florida State | 0 | at | #6 North Carolina | 4 | Box Score | Recap | |
| 3/31/2006 | * | #2 Nebraska | 5 | at | Kansas State | 11 | Box Score | Recap | |
| 3/31/2006 | * | #3 Mississippi State | 3 | at | #26 Alabama | 5 | Box Score | Recap | |
| 3/31/2006 | * | #4 Georgia Tech | 15 | at | Maryland | 4 | Box Score | Recap | |
| 3/31/2006 | * | #5 South Carolina | 12 | at | #17 Louisiana State | 2 | Box Score | Recap | |
| 3/31/2006 | * | #7 Rice | 3 | at | #14 Tulane | 1 | Box Score | Recap | |
| 3/31/2006 | * | Cal State Northridge | 1 | at | #8 Cal State Fullerton | 2 | Box Score | Recap | |
| 3/31/2006 | * | #9 Clemson | 8 | at | #19 Miami, Florida | 6 | Box Score | Recap | |
| 3/31/2006 | * | #22 Tennessee | 1 | at | #10 Arkansas | 6 | Box Score | Recap | |
| 3/31/2006 | * | #11 Arizona State | 1 | at | Washington State | 6 | Box Score | Recap | resumption of suspended game |
| 3/31/2006 | * | #11 Arizona State | 8 | at | Washington State | 3 | Box Score | Recap | |
| 3/31/2006 |
| Texas-Pan American |
| at | #12 Oregon State |
| | Recap | suspended to 4/1, rain (3-1 UTPA, Top 4) |
| 3/31/2006 | * | #13 Texas | 2 | at | #15 Oklahoma | 0 | Box Score | Recap | |
| 3/31/2006 | * | #16 Wichita State | 1 | at | Creighton | 2 | Box Score | Recap | 11 innings |
| 3/31/2006 | * | Vanderbilt | 6 | at | #18 Florida | 0 | Box Score | Recap | |
| 3/31/2006 | * | Memphis | 5 | at | #20 Southern Mississippi | 4 | Box Score | Recap | |
| 3/31/2006 | * | #23 Virginia | 2 | at | #21 North Carolina State | 10 | Box Score | Recap | |
| 3/31/2006 | * | Birmingham-Southern | 10 | at | #24 Winthrop | 6 | Box Score | Recap | |
| 3/31/2006 | * | Mississippi | 6 | at | #25 Georgia | 4 | Box Score | Recap | |
| 3/31/2006 | * | James Madison | 3 | at | #27 Old Dominion | 5 | Box Score | Recap | |
| 3/31/2006 | * | Elon | 1 | at | #28 College of Charleston | 5 | Box Score | Recap | |
| 3/31/2006 | * | #29 Baylor | 2 | at | Texas Tech | 1 | Box Score | Recap | |
| 3/31/2006 | * | #30 Kentucky | 8 | at | Auburn | 7 | Box Score | Recap | |
| America East Conference |
| 3/31/2006 |
| New York Tech | 5 | at | Stony Brook | 4 | Box Score | Recap | |
| 3/31/2006 |
| Vermont | 7 | at | Stetson | 9 | Box Score | Recap | |
| Atlantic 10 Conference |
| 3/31/2006 | * | Duquesne | 7 | at | St. Louis | 6 | Box Score | Recap | |
| 3/31/2006 | * | Fordham |
| at | Xavier |
| | Recap | PPD to 4/1, inclement weather |
| 3/31/2006 | * | Massachusetts | 10 | at | Richmond | 15 | Box Score | Recap | |
| 3/31/2006 | * | Rhode Island | 7 | at | George Washington | 0 | Box Score | Recap | |
| 3/31/2006 | * | St. Bonaventure | 7 | at | Dayton | 2 | Box Score | Recap | |
| 3/31/2006 | * | St. Joseph's | 4 | at | LaSalle | 2 | Box Score | Recap | |
| 3/31/2006 | * | Temple | 4 | at | North Carolina-Charlotte | 5 | Box Score | Recap | |
| Atlantic Coast Conference |
| 3/31/2006 | * | #1 Florida State | 0 | at | #6 North Carolina | 4 | Box Score | Recap | |
| 3/31/2006 | * | #4 Georgia Tech | 15 | at | Maryland | 4 | Box Score | Recap | |
| 3/31/2006 | * | #9 Clemson | 8 | at | #19 Miami, Florida | 6 | Box Score | Recap | |
| 3/31/2006 | * | #23 Virginia | 2 | at | #21 North Carolina State | 10 | Box Score | Recap | |
| 3/31/2006 | * | Duke | 6 | at | Boston College | 3 | Box Score | Recap | Brockton, MA (16 innings) |
| 3/31/2006 | * | Virginia Tech | 1 | at | Wake Forest | 12 | Box Score | Recap | |
| Atlantic Sun Conference |
| 3/31/2006 | * | Belmont |
| at | East Tennessee State |
| | Recap | PPD to 4/1, rain |
| 3/31/2006 | * | Campbell | 0 | at | Florida Atlantic | 2 | Box Score | Recap | No-hitter for Mickey Storey (FAU) |
| 3/31/2006 | * | Gardner-Webb | 2 | at | Jacksonville | 9 | Box Score | Recap | |
| 3/31/2006 | * | Gardner-Webb | 9 | at | Jacksonville | 10 | Box Score | Recap | |
| 3/31/2006 |
| Vermont | 7 | at | Stetson | 9 | Box Score | Recap | |
| Big 10 Conference |
| 3/31/2006 | * | Indiana | 7 | at | Michigan State | 17 | Box Score | Recap | |
| 3/31/2006 | * | Northwestern | 2 | at | Michigan | 6 | Box Score | Recap | |
| 3/31/2006 | * | Ohio State | 12 | at | Iowa | 5 | Box Score | Recap | |
| 3/31/2006 | * | Penn State | 7 | at | Minnesota | 3 | Box Score | Recap | |
| 3/31/2006 | * | Purdue | 7 | at | Illinois | 9 | Box Score | Recap | |
| Big 12 Conference |
| 3/31/2006 | * | #2 Nebraska | 5 | at | Kansas State | 11 | Box Score | Recap | |
| 3/31/2006 | * | #13 Texas | 2 | at | #15 Oklahoma | 0 | Box Score | Recap | |
| 3/31/2006 | * | #29 Baylor | 2 | at | Texas Tech | 1 | Box Score | Recap | |
| 3/31/2006 | * | Missouri | 3 | at | Kansas | 0 | Box Score | Recap | |
| 3/31/2006 | * | Texas A&M | 9 | at | Oklahoma State | 10 | Box Score | Recap | |
| Big East Conference |
| 3/31/2006 | * | Connecticut | 10 | at | Louisville | 2 | Box Score | Recap | |
| 3/31/2006 | * | Georgetown | 3 | at | St. John's | 10 | Box Score | Recap | |
| 3/31/2006 | * | Pittsburgh | 1 | at | Notre Dame | 6 | Box Score | Recap | |
| 3/31/2006 | * | South Florida |
| at | Cincinnati |
| | Recap | suspended to 4/1, rain (6-4 UC, Bottom 6) |
| 3/31/2006 | * | Villanova | 0 | at | Rutgers | 1 | Box Score | Recap | |
| 3/31/2006 | * | West Virginia |
| at | Seton Hall |
| | Recap | suspended to 4/1, darkness (7-4 WVU, Top 9) |
| Big South Conference |
| 3/31/2006 | * | Birmingham-Southern | 10 | at | #24 Winthrop | 6 | Box Score | Recap | |
| 3/31/2006 | * | High Point | 11 | at | Charleston Southern | 1 | Box Score | Recap | |
| 3/31/2006 | * | North Carolina-Asheville | 10 | at | Radford | 9 | Box Score | Recap | 10 innings |
| 3/31/2006 | * | Virginia Military | 5 | at | Liberty | 8 | Box Score | Recap | |
| Big West Conference |
| 3/31/2006 | * | Cal State Northridge | 1 | at | #8 Cal State Fullerton | 2 | Box Score | Recap | |
| 3/31/2006 | * | Pacific |
| at | Cal Poly |
| | Recap | suspended to 4/1, rain (7-1 Pacific, Top 3) |
| 3/31/2006 | * | UC Irvine | 1 | at | Long Beach State | 7 | Box Score | Recap | |
| 3/31/2006 |
| UC Davis | 2 | at | UC Riverside | 3 | Box Score | Recap | |
| 3/31/2006 |
| UC Santa Barbara | 8 | at | Hawaii-Hilo | 4 | Box Score | Recap | |
| 3/31/2006 |
| UC Santa Barbara | 12 | at | Hawaii-Hilo | 1 | Box Score | Recap | |
| Colonial Athletic Association |
| 3/31/2006 | * | James Madison | 3 | at | #27 Old Dominion | 5 | Box Score | Recap | |
| 3/31/2006 | * | Delaware | 16 | at | Towson | 8 | Box Score | Recap | |
| 3/31/2006 | * | Georgia State | 2 | at | Virginia Commonwealth | 10 | Box Score | Recap | |
| 3/31/2006 | * | Hofstra | 6 | at | William and Mary | 7 | Box Score | Recap | 11 innings |
| 3/31/2006 | * | North Carolina-Wilmington | 4 | at | Northeastern | 7 | Box Score | Recap | |
| Conference USA |
| 3/31/2006 | * | #7 Rice | 3 | at | #14 Tulane | 1 | Box Score | Recap | |
| 3/31/2006 | * | Memphis | 5 | at | #20 Southern Mississippi | 4 | Box Score | Recap | |
| 3/31/2006 | * | Houston | 4 | at | East Carolina | 3 | Box Score | Recap | |
| 3/31/2006 | * | UCF | 18 | at | Marshall | 1 | Box Score | Recap | Charleston, WV |
| 3/31/2006 |
| Alabama-Birmingham | 1 | at | Louisiana Tech | 3 | Box Score | Recap | |
| Division I Independents |
| 3/31/2006 |
| Texas-Pan American |
| at | #12 Oregon State |
| | Recap | suspended to 4/1, rain (3-1 UTPA, Top 4) |
| 3/31/2006 |
| New York Tech | 5 | at | Stony Brook | 4 | Box Score | Recap | |
| 3/31/2006 |
| North Dakota State |
| at | Northern Iowa |
| | Recap | PPD to 4/1, inclement weather |
| 3/31/2006 |
| Northwestern State | 4 | at | Dallas Baptist | 10 | Box Score | Recap | |
| 3/31/2006 |
| South Dakota State | 7 | at | Western Illinois | 6 | Box Score | Recap | |
| 3/31/2006 |
| Southern Utah | 2 | at | Utah Valley State | 6 | Box Score | Recap | |
| 3/31/2006 |
| UC Santa Barbara | 8 | at | Hawaii-Hilo | 4 | Box Score | Recap | |
| 3/31/2006 |
| UC Santa Barbara | 12 | at | Hawaii-Hilo | 1 | Box Score | Recap | |
| Mid American Conference |
| 3/31/2006 | * | Akron | 2 | at | Northern Illinois | 4 | Box Score | Recap | |
| 3/31/2006 | * | Buffalo | 0 | at | Eastern Michigan | 10 | Box Score | Recap | |
| 3/31/2006 | * | Central Michigan | 7 | at | Kent State | 5 | Box Score | Recap | |
| 3/31/2006 | * | Miami, Ohio | 13 | at | Ball State | 19 | Box Score | Recap | |
| 3/31/2006 | * | Ohio | 10 | at | Toledo | 5 | Box Score | Recap | |
| 3/31/2006 | * | Western Michigan | 5 | at | Bowling Green State | 6 | Box Score | Recap | |
| Mid Continent Conference |
| 3/31/2006 |
| Bethune-Cookman | 6 | at | Oral Roberts | 7 | Box Score | Recap | |
| 3/31/2006 |
| South Dakota State | 7 | at | Western Illinois | 6 | Box Score | Recap | |
| 3/31/2006 |
| Southern Utah | 2 | at | Utah Valley State | 6 | Box Score | Recap | |
| Mid-Eastern Athletic Conference |
| 3/31/2006 |
| Bethune-Cookman | 6 | at | Oral Roberts | 7 | Box Score | Recap | |
| Missouri Valley Conference |
| 3/31/2006 | * | #16 Wichita State | 1 | at | Creighton | 2 | Box Score | Recap | 11 innings |
| 3/31/2006 | * | Bradley | 9 | at | Southern Illinois | 6 | Box Score | Recap | |
| 3/31/2006 | * | Evansville | 1 | at | Missouri State | 4 | Box Score | Recap | |
| 3/31/2006 | * | Illinois State | 4 | at | Indiana State | 5 | Box Score | Recap | |
| 3/31/2006 |
| North Dakota State |
| at | Northern Iowa |
| | Recap | PPD to 4/1, inclement weather |
| Mountain West Conference |
| 3/31/2006 | * | Air Force | 6 | vs | Utah | 13 | Box Score | Recap | MWC Preseason Tournament, San Diego, CA |
| 3/31/2006 | * | New Mexico | 2 | vs | Brigham Young | 3 | Box Score | Recap | MWC Preseason Tournament, San Diego, CA (12 innings) |
| 3/31/2006 | * | Texas Christian | 5 | vs | Nevada-Las Vegas | 2 | Box Score | Recap | MWC Preseason Tournament, San Diego, CA |
| Pac 10 Conference |
| 3/31/2006 | * | #11 Arizona State | 1 | at | Washington State | 6 | Box Score | Recap | resumption of suspended game |
| 3/31/2006 | * | #11 Arizona State | 8 | at | Washington State | 3 | Box Score | Recap | |
| 3/31/2006 |
| Texas-Pan American |
| at | #12 Oregon State |
| | Recap | suspended to 4/1, rain (3-1 UTPA, Top 4) |
| 3/31/2006 | * | Arizona |
| at | California |
| | Recap | PPD to 4/1, rain |
| 3/31/2006 | * | Southern California |
| at | Stanford |
| | Recap | PPD to 4/1, rain |
| 3/31/2006 | * | UCLA | 0 | at | Washington | 5 | Box Score | Recap | |
| Southeastern Conference |
| 3/31/2006 | * | #3 Mississippi State | 3 | at | #26 Alabama | 5 | Box Score | Recap | |
| 3/31/2006 | * | #5 South Carolina | 12 | at | #17 Louisiana State | 2 | Box Score | Recap | |
| 3/31/2006 | * | #22 Tennessee | 1 | at | #10 Arkansas | 6 | Box Score | Recap | |
| 3/31/2006 | * | Vanderbilt | 6 | at | #18 Florida | 0 | Box Score | Recap | |
| 3/31/2006 | * | Mississippi | 6 | at | #25 Georgia | 4 | Box Score | Recap | |
| 3/31/2006 | * | #30 Kentucky | 8 | at | Auburn | 7 | Box Score | Recap | |
| Southern Conference |
| 3/31/2006 | * | Elon | 1 | at | #28 College of Charleston | 5 | Box Score | Recap | |
| 3/31/2006 | * | Georgia Southern | 0 | at | Davidson | 6 | Box Score | Recap | |
| 3/31/2006 | * | North Carolina-Greensboro | 2 | at | The Citadel | 7 | Box Score | Recap | |
| 3/31/2006 | * | Western Carolina | 11 | at | Appalachian State | 0 | Box Score | Recap | |
| 3/31/2006 | * | Wofford | 0 | at | Furman | 11 | Box Score | Recap | |
| Southland Conference |
| 3/31/2006 | * | Lamar | 8 | at | Nicholls State | 6 | Box Score | Recap | |
| 3/31/2006 | * | Louisiana-Monroe | 3 | at | Texas State | 6 | Box Score | Recap | |
| 3/31/2006 | * | McNeese State |
| at | Texas-San Antonio |
| | Recap | suspended to 4/1, darkness (Tied 11-11, Top 12) |
| 3/31/2006 | * | Southeastern Louisiana | 8 | at | Sam Houston State | 12 | Box Score | Recap | |
| 3/31/2006 | * | Texas-Arlington | 6 | at | Stephen F. Austin | 0 | Box Score | Recap | |
| 3/31/2006 |
| Northwestern State | 4 | at | Dallas Baptist | 10 | Box Score | Recap | |
| Southwestern Athletic Conference |
| 3/31/2006 | * | Texas Southern | 3 | at | Prairie View A&M | 9 | Box Score | Recap | |
| 3/31/2006 | * | Texas Southern | 3 | at | Prairie View A&M | 12 | Box Score | Recap | |
| Sun Belt Conference |
| 3/31/2006 | * | Arkansas State | 1 | at | Louisiana-Lafayette | 10 | Box Score | Recap | |
| 3/31/2006 | * | New Orleans | 4 | at | Florida International | 10 | Box Score | Recap | |
| 3/31/2006 | * | South Alabama | 4 | at | Troy | 5 | Box Score | Recap | 10 innings |
| 3/31/2006 | * | Western Kentucky | 5 | at | Arkansas-Little Rock | 4 | Box Score | Recap | |
| West Coast Conference |
| 3/31/2006 | * | Pepperdine | 1 | at | Loyola Marymount | 8 | Box Score | Recap | |
| 3/31/2006 | * | Portland | 7 | at | Gonzaga | 8 | Box Score | Recap | 10 innings |
| 3/31/2006 | * | San Francisco |
| at | Santa Clara |
| | Recap | PPD to 4/1, rain |
| 3/31/2006 | * | St. Mary's | 4 | at | San Diego | 13 | Box Score | Recap | |
| Western Athletic Conference |
| 3/31/2006 | * | Fresno State | 6 | at | New Mexico State | 3 | Box Score | Recap | |
| 3/31/2006 | * | Nevada |
| at | Cal State Sacramento |
| | Recap | suspended to 4/1, rain (1-0 Nevada, Top 3) |
| 3/31/2006 | * | San Jose State | 7 | at | Hawaii | 5 | Box Score | Recap | 12 innings |
| 3/31/2006 |
| Alabama-Birmingham | 1 | at | Louisiana Tech | 3 | Box Score | Recap | |